STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGP91579.1Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
KGP92186.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.658
KGP91744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.557
KGP90717.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.529
KGP90013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.515
KGP91782.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.515
KGP90097.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.509
KGP90680.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.495
KGP92138.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
KGP89833.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
KGP91493.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
Your Current Organism:
Pontibacillus chungwhensis
NCBI taxonomy Id: 1385513
Other names: P. chungwhensis BH030062, Pontibacillus chungwhensis BH030062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.