STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGP72070.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (133 aa)    
Predicted Functional Partners:
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.844
KGP73517.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.729
KGP73095.1
Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.692
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.654
KGP72771.1
Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.625
nuoI
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.553
KGP71980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.538
KGP72365.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.538
KGP71617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.538
KGP72050.1
Potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
Your Current Organism:
Pontibacillus yanchengensis
NCBI taxonomy Id: 1385514
Other names: P. yanchengensis Y32, Pontibacillus sp. Y32, Pontibacillus yanchengensis Y32
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