STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGP71296.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
KGP73782.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
KGP71143.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.742
KGP71750.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.741
KGP74445.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
KGP71144.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
KGP71016.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.723
KGP73019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.722
KGP73653.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
KGP71482.1
2', 3'-cyclic nucleotide 2'-phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
     
 0.719
Your Current Organism:
Pontibacillus yanchengensis
NCBI taxonomy Id: 1385514
Other names: P. yanchengensis Y32, Pontibacillus sp. Y32, Pontibacillus yanchengensis Y32
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.