STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN35896.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
KGN35895.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
KGN29252.1
Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 
0.931
KGN29578.1
Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.912
KGN29645.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.908
KGN35936.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.906
KGN35869.1
Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.901
KGN33094.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.858
KGN35308.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.853
KGN35441.1
Metal ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.837
KGN31115.1
ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.826
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
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