STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN35971.1DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
KGN35972.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
KGN35974.1
Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.710
KGN35973.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.701
KGN30115.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.538
KGN35975.1
Mannitol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.
 
     0.529
KGN35976.1
Sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.522
KGN35970.1
Sucraseferredoxin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
xylB
Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.459
gpsA
Glycerol-3-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.422
KGN35969.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.