STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN35406.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
KGN35407.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.984
KGN35441.1
Metal ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.957
KGN35405.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.953
potA
ABC transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
  0.946
KGN35219.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
     
  0.943
KGN33479.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.942
KGN33480.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.942
KGN28992.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.942
KGN31115.1
ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.934
KGN35936.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.923
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
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