STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN34039.1Hydantoinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (660 aa)    
Predicted Functional Partners:
KGN34038.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.999
KGN34041.1
Cytosine deaminase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.838
KGN34036.1
Carbon monoxide dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.831
KGN34040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.827
KGN34052.1
Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.
 
     0.804
KGN34029.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.754
KGN34035.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.737
KGN34033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.698
KGN34042.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.596
KGN34043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.596
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.