STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN33619.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (183 aa)    
Predicted Functional Partners:
KGN33600.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
glpX
Type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.685
KGN33558.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.677
KGN29865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.654
KGN29335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.647
KGN35967.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
KGN30479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
KGN35379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.598
KGN33559.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
       0.595
KGN33557.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.