KGN31378.1 protein (Knoellia flava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

KGN31378.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)

Predicted Functional Partners:

KGN31427.1

0.808

KGN31752.1

0.799

KGN35765.1

0.750

KGN29482.1

0.619

KGN29481.1

0.612

KGN29588.1

0.590

KGN31379.1

0.570

KGN29587.1

0.557

KGN30244.1

0.524

KGN30269.1

0.524

Your Current Organism:

Knoellia flava

NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGN29481.1	KGN29482.1	N798_13125	N798_13130	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGN29481.1	KGN29587.1	N798_13125	N798_13750	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
KGN29481.1	KGN29588.1	N798_13125	N798_13755	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
KGN29481.1	KGN31378.1	N798_13125	N798_08850	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.612
KGN29481.1	KGN31752.1	N798_13125	N798_08105	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.661
KGN29481.1	KGN35765.1	N798_13125	N798_00500	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
KGN29482.1	KGN29481.1	N798_13130	N798_13125	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGN29482.1	KGN29587.1	N798_13130	N798_13750	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
KGN29482.1	KGN29588.1	N798_13130	N798_13755	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
KGN29482.1	KGN31378.1	N798_13130	N798_08850	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
KGN29482.1	KGN31752.1	N798_13130	N798_08105	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.666
KGN29482.1	KGN35765.1	N798_13130	N798_00500	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
KGN29587.1	KGN29481.1	N798_13750	N798_13125	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
KGN29587.1	KGN29482.1	N798_13750	N798_13130	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
KGN29587.1	KGN29588.1	N798_13750	N798_13755	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
KGN29587.1	KGN30244.1	N798_13750	N798_11115	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.434
KGN29587.1	KGN30269.1	N798_13750	N798_11240	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.434
KGN29587.1	KGN31378.1	N798_13750	N798_08850	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
KGN29587.1	KGN31752.1	N798_13750	N798_08105	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.683
KGN29587.1	KGN35765.1	N798_13750	N798_00500	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640