KGN31066.1 protein (Knoellia flava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KGN31066.1

Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (597 aa)

Predicted Functional Partners:

KGN34067.1

0.949

pstB

0.923

KGN31395.1

0.904

KGN35296.1

0.897

KGN35218.1

0.884

KGN35219.1

0.884

ftsE

0.884

KGN35308.1

0.870

dnaK

0.857

KGN33479.1

0.856

Your Current Organism:

Knoellia flava

NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGN31066.1	KGN31395.1	N798_09435	N798_08955	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.904
KGN31066.1	KGN33479.1	N798_09435	N798_05785	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
KGN31066.1	KGN34067.1	N798_09435	N798_05330	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.949
KGN31066.1	KGN35218.1	N798_09435	N798_03880	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Metal ABC transporter ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.	0.884
KGN31066.1	KGN35219.1	N798_09435	N798_03885	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.884
KGN31066.1	KGN35296.1	N798_09435	N798_03510	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Iron-dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.897
KGN31066.1	KGN35308.1	N798_09435	N798_03570	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.870
KGN31066.1	dnaK	N798_09435	N798_01435	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.857
KGN31066.1	ftsE	N798_09435	N798_16715	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.884
KGN31066.1	pstB	N798_09435	N798_00605	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.923
KGN31395.1	KGN31066.1	N798_08955	N798_09435	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.904
KGN31395.1	KGN33479.1	N798_08955	N798_05785	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
KGN31395.1	KGN35218.1	N798_08955	N798_03880	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Metal ABC transporter ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.	0.469
KGN31395.1	KGN35219.1	N798_08955	N798_03885	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.851
KGN31395.1	KGN35308.1	N798_08955	N798_03570	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.975
KGN33479.1	KGN31066.1	N798_05785	N798_09435	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.856
KGN33479.1	KGN31395.1	N798_05785	N798_08955	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.651
KGN33479.1	KGN34067.1	N798_05785	N798_05330	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.922
KGN33479.1	KGN35218.1	N798_05785	N798_03880	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.	0.431
KGN33479.1	KGN35219.1	N798_05785	N798_03885	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.958