STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN30359.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
KGN30353.1
SAM-dependent methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
      0.922
KGN33540.1
Kojibiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.857
hisE
phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      0.825
KGN28926.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.757
KGN35966.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.735
KGN29204.1
Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.735
KGN29430.1
Riboflavin kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ribF family.
     
 0.734
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.730
KGN30360.1
Carboxylate-amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
KGN29203.1
DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.684
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.