STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGN29921.1Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (150 aa)    
Predicted Functional Partners:
KGN29922.1
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.628
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.621
KGN29923.1
Zn-finger-containing protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.595
KGN29931.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.582
KGN29920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phosphoglycerate mutase family.
       0.570
KGN35962.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
KGN29924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.508
KGN29716.1
Pyridoxamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxine kinase family.
     
  0.499
KGN28955.1
3-hexulose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.494
KGN29278.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
Your Current Organism:
Knoellia flava
NCBI taxonomy Id: 1385518
Other names: K. flava TL1, Knoellia flava TL1, Knoellia sp. TL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.