STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472025_02636Unannotated protein. (463 aa)    
Predicted Functional Partners:
GCA_000472025_01339
Unannotated protein.
0.944
GCA_000472025_02023
Unannotated protein.
 
0.935
GCA_000472025_02140
Unannotated protein.
 
0.900
GCA_000472025_00805
Unannotated protein.
 0.894
GCA_000472025_02108
Unannotated protein.
 
0.894
GCA_000472025_00804
Unannotated protein.
 
0.893
GCA_000472025_02356
Unannotated protein.
 
0.891
GCA_000472025_00786
Unannotated protein.
 
0.871
GCA_000472025_03148
Unannotated protein.
 
0.870
GCA_000472025_03500
Unannotated protein.
 
0.867
Your Current Organism:
Gordonia amicalis
NCBI taxonomy Id: 1386969
Other names: G. amicalis CCMA-559, Gordonia amicalis CCMA-559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.