STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472025_03670Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_000472025_01443
Unannotated protein.
    
 0.984
GCA_000472025_03669
Unannotated protein.
 
  0.898
GCA_000472025_03657
Unannotated protein.
 
  0.883
GCA_000472025_03432
Unannotated protein.
 
  0.874
GCA_000472025_03672
Unannotated protein.
 
  0.866
GCA_000472025_03673
Unannotated protein.
 
  0.857
GCA_000472025_03671
Unannotated protein.
 
  0.853
GCA_000472025_03674
Unannotated protein.
 
     0.853
GCA_000472025_02249
Unannotated protein.
   
 0.822
GCA_000472025_03668
Unannotated protein.
 
  0.783
Your Current Organism:
Gordonia amicalis
NCBI taxonomy Id: 1386969
Other names: G. amicalis CCMA-559, Gordonia amicalis CCMA-559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.