STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000471645_01685Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000471645_01684
Unannotated protein.
 0.999
GCA_000471645_00364
Unannotated protein.
 
  
 0.814
GCA_000471645_00057
Unannotated protein.
    
 0.781
GCA_000471645_01686
Unannotated protein.
  
  
 0.554
GCA_000471645_00434
Unannotated protein.
     
 0.549
GCA_000471645_01013
Unannotated protein.
    
  0.538
GCA_000471645_01227
Unannotated protein.
   
 
  0.515
GCA_000471645_00371
Unannotated protein.
     
 0.508
GCA_000471645_01012
Unannotated protein.
   
 
  0.507
GCA_000471645_00151
Unannotated protein.
   
 
  0.504
Your Current Organism:
Schmidhempelia bombi
NCBI taxonomy Id: 1387197
Other names: C. Schmidhempelia bombi str. Bimp, Candidatus Schmidhempelia bombi str. Bimp, Orbaceae bacterium Bimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.