STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD01406.1Response regulator receiver and ANTAR domain protein. (224 aa)    
Predicted Functional Partners:
SMD01413.1
NitT/TauT family transport system ATP-binding protein.
  
 0.965
SMD01463.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.911
SMD01421.1
Nitrate/nitrite transport system substrate-binding protein.
 
  
 0.901
SMD01447.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
  
 0.891
SMD01446.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.876
SMD01426.1
Nitrate/nitrite transport system permease protein.
 
   
 0.845
SMD01435.1
Nitrate/nitrite transport system ATP-binding protein.
 
     0.812
SMD01480.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
 
 
 0.759
SMD01469.1
Anthranilate phosphoribosyltransferase.
 
     0.652
SMC45663.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.634
Your Current Organism:
Pseudooceanicola flagellatus
NCBI taxonomy Id: 1387277
Other names: CGMCC 1.12664, LMG 27871, LMG:27871, Oceanicola flagellatus, Oceanicola flagellatus Huo et al. 2014, Oceanicola sp. DY470, P. flagellatus, Pseudooceanicola flagellatus (Huo et al. 2014) Huang et al. 2018, strain DY470
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