STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcsBProtein-arginine kinase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family. (354 aa)    
Predicted Functional Partners:
mcsA_1
Protein-arginine kinase activator protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P37569.
 
  
 0.989
mcsA_2
Protein-arginine kinase activator protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P37569.
 
  
 0.980
APW58895.1
Nuclease subunit; Ab initio prediction:Prodigal:2.6.
  
  
 0.770
APW60064.1
Hypothetical protein; Manual prediction; probably involved in trehalose utilization.
  
  
 0.770
clpC
Negative regulator of genetic competence ClpC/MecB; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P37571; Belongs to the ClpA/ClpB family.
 
 
 0.756
APW63573.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.714
thiE
Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
 
 0.655
clpB_1
Chaperone protein ClpB; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q7WSY8; Belongs to the ClpA/ClpB family.
  
 
 0.649
clpB_2
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.649
APW62284.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
 
    0.565
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.