STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
carB6Beta-lactamase CARB-6; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P81781. (338 aa)    
Predicted Functional Partners:
APW62776.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
     
  0.900
APW60215.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
       0.645
APW63952.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.633
APW63576.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.602
APW61185.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.572
APW60678.1
Putative beta-propeller-type glycoside hydrolase of unknown function, putative beta-galactosidase; Manual prediction.
  
     0.539
APW60213.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
       0.491
APW60734.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.488
APW60732.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.478
mtnX
2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase; Ab initio prediction:Prodigal:2.6; protein motif:HAMAP:MF_01680.
  
     0.478
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.