STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macA_6Macrolide export protein MacA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P75830; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (463 aa)    
Predicted Functional Partners:
mdtC_1
Multidrug resistance protein MdtC; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:A8A1U8; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     0.860
mdtN_2
Multidrug resistance protein MdtN; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P32716; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.755
mdtC_2
Multidrug resistance protein MdtC; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:A7ZNP9; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.731
czcA_6
Cobalt-zinc-cadmium resistance protein CzcA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P13511; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.712
APW60211.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.692
mdtN_1
Multidrug resistance protein MdtN; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P32716.
  
     0.669
macA_2
Macrolide export protein MacA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P75830; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.657
tolC
Outer membrane protein TolC; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q54001.
  
   0.620
macA_5
Macrolide export protein MacA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P75830.
  
    0.601
macA_3
Macrolide export protein MacA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P75830; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.592
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.