STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW60423.1Hypothetical protein; Ab initio prediction:Prodigal:2.6. (568 aa)    
Predicted Functional Partners:
APW61961.1
Putative beta-propeller-type glycoside hydrolase of unknown function, putative beta-galactosidase; Manual prediction.
  
     0.715
APW62744.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
     0.689
uxaC
Uronate isomerase; Ab initio prediction:Prodigal:2.6; protein motif:HAMAP:MF_00675.
  
     0.666
APW58883.1
Ab initio prediction:Prodigal:2.6.
  
     0.652
APW60422.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
 
    
0.652
APW58795.1
Putative beta-propeller-type glycoside hydrolase of unknown function, putative beta-galactosidase; Manual prediction.
  
     0.632
afr_2
1,5-anhydro-D-fructose reductase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q2I8V6.
  
     0.622
blaR1_11
Regulatory protein BlaR1; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P12287.
  
     0.613
APW58905.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6; Belongs to the OprB family.
  
   
 0.604
oprO_2
Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P32977.
  
     0.598
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.