STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiFSulfur carrier protein ThiS adenylyltransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P30138. (404 aa)    
Predicted Functional Partners:
APW61095.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
 
 0.997
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 0.996
cysO
Sulfur carrier protein CysO; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P9WP33.
  
 0.980
nifS
Cysteine desulfurase NifS; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P05341.
   
 0.964
iscS
Cysteine desulfurase IscS; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A6B7; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 0.964
APW61520.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
  
 0.962
APW61097.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6.
 
 
 0.960
moeZ_2
Putative adenylyltransferase/sulfurtransferase MoeZ; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P9WMN7.
  
  
 
0.928
moaE
Molybdopterin synthase catalytic subunit; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P65401.
 0.911
thiE
Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
 
 0.834
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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