STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwf2Glucose-6-phosphate 1-dehydrogenase 2; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (517 aa)    
Predicted Functional Partners:
APW58992.1
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:G5EBD7.
  
 0.975
pgi
Glucose-6-phosphate isomerase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A6T1; Belongs to the GPI family.
  
 
 0.957
gndA
6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
 
 0.932
pgl
6-phosphogluconolactonase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O34499.
    
 0.919
zwf1
Glucose-6-phosphate 1-dehydrogenase 1; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 
0.910
gap
Glyceraldehyde-3-phosphate dehydrogenase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P17721; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.897
pyk
Pyruvate kinase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q02499; Belongs to the pyruvate kinase family.
  
 
 0.861
fbaA
Putative fructose-bisphosphate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P13243.
   
 
 0.838
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
 
 0.837
ldh
L-lactate dehydrogenase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P00345; Belongs to the LDH/MDH superfamily.
   
 
 0.832
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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