STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
fabF_53-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (421 aa)    
Predicted Functional Partners:
fabD
Malonyl CoA-acyl carrier protein transacylase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O85140.
 0.998
fabH_1
3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
 0.986
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q81GI3.
 
 
 0.977
APW58971.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:B2HIL7.
  
 
0.967
APW62355.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:B2HIL7.
  
 
0.967
dltA
D-alanine--poly(phosphoribitol) ligase subunit 1; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P39581; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.905
desA1
Putative acyl-[acyl-carrier-protein] desaturase desA1; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P9WNZ7.
   
 
 0.904
ppsC
Phthiocerol synthesis polyketide synthase type I PpsC; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P96202.
 
 
    0.900
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0AEK2.
  0.887
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  0.856
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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