STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resA_10Thiol-disulfide oxidoreductase ResA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q81SZ9. (472 aa)    
Predicted Functional Partners:
resA_11
Thiol-disulfide oxidoreductase ResA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q81SZ9.
 
 0.727
resA_18
Thiol-disulfide oxidoreductase ResA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P35160.
  
     0.717
stoA
Sporulation thiol-disulfide oxidoreductase A; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O31687.
  
     0.667
pknB_21
Serine/threonine-protein kinase PknB; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:A0QNG1.
  
 0.621
dsbD_2
Thiol:disulfide interchange protein DsbD; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9JYM0.
 
 
 0.616
APW62465.1
Hypothetical protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P54178; SCO1 protein homolog.
  
   0.573
sodC
Superoxide dismutase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P15453.
   
 0.514
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.512
msrA2
Peptide methionine sulfoxide reductase MsrA 2; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.512
resA_20
Thiol-disulfide oxidoreductase ResA; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q81SZ9.
  
 0.480
Your Current Organism:
Paludisphaera borealis
NCBI taxonomy Id: 1387353
Other names: DSM 28747, Isosphaera sp. PX4, P. borealis, Paludisphaera borealis Kulichevskaya et al. 2016, Planctomycetaceae bacterium PT1, VKM B-2904, strain PX4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.