Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APW63497.1 | aspC | BSF38_05068 | BSF38_00414 | Aspartate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P23034. | Aspartate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q56232. | 0.923 |
| APW63497.1 | hisC_2 | BSF38_05068 | BSF38_05474 | Aspartate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P23034. | Histidinol-phosphate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q39YP6; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.919 |
| APW63497.1 | pheA | BSF38_05068 | BSF38_04171 | Aspartate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P23034. | P-protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A9J8. | 0.941 |
| APW63497.1 | tyrA | BSF38_05068 | BSF38_05665 | Aspartate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P23034. | Prephenate dehydrogenase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O69721. | 0.913 |
| aroA | aroC | BSF38_05534 | BSF38_04275 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.996 |
| aroA | aroF_1 | BSF38_05534 | BSF38_02745 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Phospho-2-dehydro-3-deoxyheptonate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9WYH8. | 0.504 |
| aroA | hisC_2 | BSF38_05534 | BSF38_05474 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Histidinol-phosphate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q39YP6; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.540 |
| aroA | pabA | BSF38_05534 | BSF38_04999 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Aminodeoxychorismate/anthranilate synthase component 2; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P28819. | 0.471 |
| aroA | pheA | BSF38_05534 | BSF38_04171 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | P-protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A9J8. | 0.921 |
| aroA | tyrA | BSF38_05534 | BSF38_05665 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydrogenase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O69721. | 0.979 |
| aroC | aroA | BSF38_04275 | BSF38_05534 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.996 |
| aroC | aroF_1 | BSF38_04275 | BSF38_02745 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Phospho-2-dehydro-3-deoxyheptonate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9WYH8. | 0.696 |
| aroC | hisC_2 | BSF38_04275 | BSF38_05474 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Histidinol-phosphate aminotransferase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q39YP6; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.762 |
| aroC | pabA | BSF38_04275 | BSF38_04999 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminodeoxychorismate/anthranilate synthase component 2; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P28819. | 0.916 |
| aroC | pheA | BSF38_04275 | BSF38_04171 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | P-protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A9J8. | 0.989 |
| aroC | trpE | BSF38_04275 | BSF38_01448 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.950 |
| aroC | tyrA | BSF38_04275 | BSF38_05665 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Prephenate dehydrogenase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:O69721. | 0.860 |
| aroF_1 | aroA | BSF38_02745 | BSF38_05534 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9WYH8. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.504 |
| aroF_1 | aroC | BSF38_02745 | BSF38_04275 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9WYH8. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.696 |
| aroF_1 | pheA | BSF38_02745 | BSF38_04171 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:Q9WYH8. | P-protein; Ab initio prediction:Prodigal:2.6; similar to AA sequence:UniProtKB:P0A9J8. | 0.920 |
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