STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000955735_01977Unannotated protein. (304 aa)    
Predicted Functional Partners:
GCA_000955735_01976
Unannotated protein.
     0.994
GCA_000955735_01975
Unannotated protein.
       0.497
GCA_000955735_01791
Unannotated protein.
    
   0.437
Your Current Organism:
Caldicellulosiruptor naganoensis
NCBI taxonomy Id: 1387569
Other names: C. naganoensis NA10, Caldicellulosiruptor naganoensis NA10, Thermoanaerobacter cellulolyticus DSM 8991, Thermoanaerobacter cellulolyticus IFO 14436, Thermoanaerobacter cellulolyticus NA10, Thermoanaerobacter cellulolyticus NBRC 14436
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.