STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF81192.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
SMF74961.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 
     0.920
SMF81199.1
NAD+-dependent secondary alcohol dehydrogenase Adh1.
 
    0.767
SMF81228.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.727
SMF81235.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.495
SMF81482.1
Dihydrolipoamide dehydrogenase.
     
 0.491
SMF81232.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.490
SMF81240.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
    0.412
SMF81245.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
    0.412
Your Current Organism:
Pelagibacter sp. HIMB1321
NCBI taxonomy Id: 1388755
Other names: C. Pelagibacter sp. HIMB1321, Candidatus Pelagibacter sp. HIMB1321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.