AIN57692.1 protein (Pseudomonas mosselii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AIN57692.1

Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)

Predicted Functional Partners:

AIN57694.1

0.967

AIN57690.1

0.925

AIN57695.1

0.883

AIN57696.1

0.873

AIN57693.1

0.768

AIN57691.1

0.751

AIN60537.1

0.718

AIN61380.1

0.714

AIN60580.1

0.713

AIN58846.1

0.710

Your Current Organism:

Pseudomonas mosselii

NCBI taxonomy Id: 1388763
Other names: P. mosselii SJ10, Pseudomonas mosselii SJ10

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIN57690.1	AIN57691.1	O165_004980	O165_004985	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AIN57690.1	AIN57692.1	O165_004980	O165_004990	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
AIN57690.1	AIN57693.1	O165_004980	O165_004995	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
AIN57690.1	AIN57694.1	O165_004980	O165_005000	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AIN57690.1	AIN57695.1	O165_004980	O165_005005	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
AIN57690.1	AIN57696.1	O165_004980	O165_005010	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
AIN57690.1	AIN58846.1	O165_004980	O165_011440	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AIN57690.1	AIN60537.1	O165_004980	O165_020410	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
AIN57690.1	AIN60580.1	O165_004980	O165_020630	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
AIN57690.1	AIN61380.1	O165_004980	O165_024870	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
AIN57691.1	AIN57690.1	O165_004985	O165_004980	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AIN57691.1	AIN57692.1	O165_004985	O165_004990	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AIN57691.1	AIN57693.1	O165_004985	O165_004995	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.719
AIN57691.1	AIN57694.1	O165_004985	O165_005000	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AIN57691.1	AIN57695.1	O165_004985	O165_005005	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AIN57691.1	AIN57696.1	O165_004985	O165_005010	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.546
AIN57692.1	AIN57690.1	O165_004990	O165_004980	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
AIN57692.1	AIN57691.1	O165_004990	O165_004985	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AIN57692.1	AIN57693.1	O165_004990	O165_004995	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
AIN57692.1	AIN57694.1	O165_004990	O165_005000	Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967