STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIN57811.1Glycoside hydrolase family 19; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)    
Predicted Functional Partners:
AIN57812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.889
AIN57813.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.738
AIN56928.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
AIN56929.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.622
AIN57804.1
Tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.609
AIN57977.1
Tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.609
AIN58698.1
Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.599
AIN56938.1
Phage late control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.591
AIN57809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.585
AIN57981.1
Host specificity protein J; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.585
Your Current Organism:
Pseudomonas mosselii
NCBI taxonomy Id: 1388763
Other names: P. mosselii SJ10, Pseudomonas mosselii SJ10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.