STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017S9E9GYF domain-containing protein. (453 aa)    
Predicted Functional Partners:
A0A017SGW4
Pre-mRNA splicing helicase.
   
 
 0.980
A0A017SKE6
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.959
A0A017SN98
Pre-mRNA processing splicing factor 8.
    
 
 0.950
A0A017S6I7
Dead box ATP-dependent rna helicase.
   
 
 0.943
A0A017SAK1
TPR_REGION domain-containing protein.
   
 
 0.943
A0A017SHX2
Putative U5 snRNP component.
    
 
 0.923
A0A017SSA3
Putative DNA binding protein SART-1.
   
 
 0.920
A0A017S0H2
Uncharacterized protein.
   
 
 0.877
A0A017SD65
Sm-like ribonucleo protein.
    
 
 0.849
A0A017SCP7
Sm-like ribonucleo protein.
    
 
 0.843
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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