STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SC69Eukaryotic translation initiation factor 2c. (870 aa)    
Predicted Functional Partners:
A0A017SJZ8
RanBD1 domain-containing protein.
   
 
  0.976
A0A017SAG6
Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
   
 0.952
A0A017SM45
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.952
A0A017SGW3
Ribonuclease III.
    
 0.893
A0A017SEP8
Ribonuclease III.
    
 0.861
A0A017S628
60S ribosomal protein L3.
    
 0.844
A0A017SFE1
Putative nonsense-mediated mRNA decay protein.
    
 0.785
A0A017SFG1
Translin.
    
 0.783
A0A017SBB7
Translin.
   
 0.764
A0A017SHY6
F-box domain-containing protein.
    
 0.739
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.