STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SCK5Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
A0A017S7F4
L51_S25_CI-B8 domain-containing protein.
   
 
 0.994
A0A017SDY5
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.992
A0A017SNF6
Putative mitochondrial ribosomal protein.
   
 
 0.992
A0A017S869
Mitochondrial ribosomal protein Dap3.
   
 
 0.991
A0A017SGF6
Uncharacterized protein.
   
   0.990
A0A017SFL7
50S ribosomal subunit protein L15.
   
 
 0.989
A0A017S4A0
50S ribosomal protein L4.
   
 
 0.988
A0A017SB33
Putative mitochondrial ribosomal protein L23.
   
   0.986
A0A017S628
60S ribosomal protein L3.
   
 
 0.985
A0A017S8J5
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.985
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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