STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SDU64-hydroxyphenylpyruvate dioxygenase. (401 aa)    
Predicted Functional Partners:
A0A017SFY4
Putative homogentisate 1,2-dioxygenase.
  
 0.989
A0A017S5Z5
Homogentisate 1,2-dioxygenase.
  
 0.987
A0A017STC0
Aspartate aminotransferase.
  
 
 0.924
A0A017SS75
Histidinol-phosphate aminotransferase.
    
 0.920
A0A017SFW0
Putative aspartate transaminase.
  
 
 0.918
A0A017SKU9
Aspartate aminotransferase.
  
 
 0.918
A0A017SBM5
Putative aspartate aminotransferase.
  
 
 0.915
A0A017SIY2
PLP-dependent transferase.
  
 
 0.901
A0A017S8B6
Propionyl-CoA carboxylase subunit beta.
  
 
 0.896
A0A017SFL1
ClpP/crotonase.
  
 
 0.896
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.