STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SEU0Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1060 aa)    
Predicted Functional Partners:
A0A017SAB0
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A017SBD9
Putative Nup133 nucleoporin.
  
 0.999
A0A017SJZ8
RanBD1 domain-containing protein.
   
 0.999
A0A017SLU8
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A017SS38
Peptidase S59 domain-containing protein.
   
 0.999
A0A017S8W4
NIC-domain-containing protein.
   
 0.994
A0A017S2R2
Uncharacterized protein.
   
 0.993
A0A017S5Y2
Nup54 domain-containing protein.
   
 0.991
A0A017SP23
Putative non-repetitive nucleoporin.
   
 0.991
A0A017S4T5
Uncharacterized protein.
  
 0.990
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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