A0A017SG58 protein (Aspergillus ruber) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A017SG58

Uncharacterized protein. (758 aa)

Predicted Functional Partners:

A0A017SEB1

0.780

A0A017SGK0

0.780

A0A017S616

0.723

A0A017SE30

0.723

A0A017SFJ5

0.723

A0A017SLI0

0.723

A0A017S3M8

0.599

A0A017SR02

0.591

A0A017S175

0.589

A0A017SGP6

0.589

Your Current Organism:

Aspergillus ruber

NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A017S175	A0A017S3M8	37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	37S ribosomal protein S11.	0.999
A0A017S175	A0A017SG58	37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.589
A0A017S175	A0A017SGP6	37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	37S ribosomal protein Mrp17.	0.999
A0A017S175	A0A017SR02	37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Putative 40S ribosomal protein S2.	0.999
A0A017S3M8	A0A017S175	37S ribosomal protein S11.	37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A017S3M8	A0A017SG58	37S ribosomal protein S11.	Uncharacterized protein.	0.599
A0A017S3M8	A0A017SGP6	37S ribosomal protein S11.	37S ribosomal protein Mrp17.	0.999
A0A017S3M8	A0A017SR02	37S ribosomal protein S11.	Putative 40S ribosomal protein S2.	0.999
A0A017S616	A0A017SE30	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Nitrate reductase.	0.974
A0A017S616	A0A017SFJ5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Putative nitrate reductase.	0.974
A0A017S616	A0A017SG58	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.723
A0A017S616	A0A017SLI0	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Putative cytochrome B5.	0.973
A0A017SE30	A0A017S616	Nitrate reductase.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.974
A0A017SE30	A0A017SFJ5	Nitrate reductase.	Putative nitrate reductase.	0.973
A0A017SE30	A0A017SG58	Nitrate reductase.	Uncharacterized protein.	0.723
A0A017SE30	A0A017SLI0	Nitrate reductase.	Putative cytochrome B5.	0.973
A0A017SEB1	A0A017SG58	Uncharacterized protein.	Uncharacterized protein.	0.780
A0A017SEB1	A0A017SGK0	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A017SFJ5	A0A017S616	Putative nitrate reductase.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.974
A0A017SFJ5	A0A017SE30	Putative nitrate reductase.	Nitrate reductase.	0.973