STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SGP1Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
A0A017S287
60S ribosomal protein L7A.
   
 0.999
A0A017S2B4
60S ribosomal protein L35.
   
 0.999
A0A017S2F0
Ribosomal protein L26.
   
 0.999
A0A017S3H2
60S ribosomal protein L7.
   
 0.999
A0A017S3M5
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
A0A017S3R6
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
A0A017S6H6
Uncharacterized protein.
   
 0.999
A0A017S6I9
60S ribosomal protein L9-B.
   
 0.999
A0A017S898
60S ribosomal protein.
   
 0.999
A0A017S8Z1
60S ribosomal protein L2.
   
 0.999
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.