STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A017SMM0Histone deacetylase RpdA/Rpd3. (726 aa)    
Predicted Functional Partners:
A0A017SQM4
Chromatin assembly factor 1 subunit C.
   
 0.977
A0A017SU54
Chromatin modification-related protein eaf3.
    
 0.974
A0A017S6M0
HDAC_interact domain-containing protein.
   
 0.973
A0A017S6P1
FAS1 domain-containing protein.
   
 0.973
A0A017S4J1
WD repeat protein.
   
 0.961
A0A017S281
SANT domain-containing protein.
    
 0.960
A0A017S2G5
Putative chromatin remodeling complex subunit.
   
 0.954
A0A017S9C8
Uncharacterized protein.
   
 0.944
A0A017SLV0
PAPA-1-domain-containing protein.
    
 0.939
A0A017SD42
Chromatin modification-related protein.
    
 0.937
Your Current Organism:
Aspergillus ruber
NCBI taxonomy Id: 1388766
Other names: A. ruber CBS 135680, Aspergillus ruber CBS 135680, Aspergillus rubrum CBS 135680, Eurotium rubrum CBS 135680
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.