STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA23347.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
siaP_1
Sialic acid-binding periplasmic protein SiaP precursor.
 
    0.930
siaT_3
Sialic acid TRAP transporter permease protein SiaT.
 
     0.876
siaT_4
Sialic acid TRAP transporter permease protein SiaT.
 
     0.847
cytR_1
HTH-type transcriptional repressor CytR.
 
     0.804
gno_1
Gluconate 5-dehydrogenase.
 
     0.780
gutB
Sorbitol dehydrogenase.
 
     0.766
hpsN_1
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.595
uspG_1
Universal stress protein G.
 
     0.456
KPA22179.1
Bacterial extracellular solute-binding protein, family 3.
  
     0.436
Your Current Organism:
Shimia sp. SK013
NCBI taxonomy Id: 1389006
Other names: S. sp. SK013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.