Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPA19943.1 | KPA22988.1 | shim_39020 | shim_12810 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPA19943.1 | fdhD | shim_39020 | shim_22560 | Hypothetical protein. | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.756 |
KPA19943.1 | moaB | shim_39020 | shim_25750 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | 0.407 |
KPA19943.1 | moaE | shim_39020 | shim_28040 | Hypothetical protein. | Molybdopterin synthase catalytic subunit. | 0.522 |
KPA19943.1 | mobB | shim_39020 | shim_22590 | Hypothetical protein. | Molybdopterin-guanine dinucleotide biosynthesis adapter protein. | 0.779 |
KPA19943.1 | moeA_1 | shim_39020 | shim_06260 | Hypothetical protein. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.433 |
KPA19943.1 | moeA_2 | shim_39020 | shim_22600 | Hypothetical protein. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.433 |
KPA21550.1 | fdhD | shim_22570 | shim_22560 | Hypothetical protein. | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.773 |
KPA21550.1 | mobA_2 | shim_22570 | shim_22580 | Hypothetical protein. | Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.773 |
KPA21550.1 | mobB | shim_22570 | shim_22590 | Hypothetical protein. | Molybdopterin-guanine dinucleotide biosynthesis adapter protein. | 0.773 |
KPA21550.1 | moeA_2 | shim_22570 | shim_22600 | Hypothetical protein. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.773 |
KPA22988.1 | KPA19943.1 | shim_12810 | shim_39020 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPA22988.1 | fdhD | shim_12810 | shim_22560 | Hypothetical protein. | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.403 |
KPA22988.1 | moaB | shim_12810 | shim_25750 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | 0.494 |
KPA22988.1 | moaC | shim_12810 | shim_06270 | Hypothetical protein. | Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.591 |
KPA22988.1 | moaE | shim_12810 | shim_28040 | Hypothetical protein. | Molybdopterin synthase catalytic subunit. | 0.742 |
KPA22988.1 | mobA_2 | shim_12810 | shim_22580 | Hypothetical protein. | Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.892 |
KPA22988.1 | mobB | shim_12810 | shim_22590 | Hypothetical protein. | Molybdopterin-guanine dinucleotide biosynthesis adapter protein. | 0.759 |
KPA22988.1 | moeA_1 | shim_12810 | shim_06260 | Hypothetical protein. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.698 |
KPA22988.1 | moeA_2 | shim_12810 | shim_22600 | Hypothetical protein. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.698 |
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