STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livF_7High-affinity branched-chain amino acid transport ATP-binding protein LivF. (257 aa)    
Predicted Functional Partners:
KPA20029.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
livH_7
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
  0.968
KPA21607.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.924
braC_2
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.
 
 
  0.919
cysA_3
Sulfate/thiosulfate import ATP-binding protein CysA.
 
 
 
0.917
livH_4
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.877
KPA20049.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.874
KPA21814.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.869
livH_3
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.841
KPA23310.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  0.830
Your Current Organism:
Shimia sp. SK013
NCBI taxonomy Id: 1389006
Other names: S. sp. SK013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.