STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGW42150.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
AGW42151.1
ABC transporter ATP-binding protein.
 
 
 0.925
AGW42152.1
Hypothetical protein.
  
 
 0.887
AGW40413.1
Preprotein translocase subunit SecD; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.606
AGW40956.1
Mg++/citrate complex transporter.
  
 
 0.606
AGW41233.1
Hemagglutinin/hemolysin-like protein.
  
    0.603
AGW41860.1
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.595
AGW40535.1
Hypothetical protein.
  
     0.491
AGW40787.1
LuxR family transcriptional regulator.
  
     0.430
AGW41031.1
Hypothetical protein.
  
     0.425
AGW42596.1
Hypothetical protein.
  
    0.424
Your Current Organism:
Leifsonia xyli cynodontis
NCBI taxonomy Id: 1389489
Other names: L. xyli subsp. cynodontis DSM 46306, Leifsonia xyli subsp. cynodontis DSM 46306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.