STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbfARibosome-binding factor A. (115 aa)    
Predicted Functional Partners:
infB
Initiation factor IF-2.
  
  
 0.989
truB
tRNA pseudouridine 55 synthase.
 
  
 0.988
rpsO
Ribosomal protein S15 (BS18).
  
 
 0.932
ylxP
Conserved hypothetical protein.
  
  
 0.899
ylxS
Putative RNA-binding protein.
 
 
 0.893
rpsQ
Ribosomal protein S17 (BS16).
  
 
 0.879
rpsE
Ribosomal protein S5.
   
 
 0.859
rpsG
Ribosomal protein S7 (BS7).
   
 
 0.851
rpsD
Ribosomal protein S4 (BS4).
  
 
 0.837
rpsR
Ribosomal protein S18.
   
 
 0.828
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.