STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD62142.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
SDD62093.1
UDP-glucuronate 4-epimerase.
       0.727
SDD62054.1
Capsular exopolysaccharide family.
       0.583
SDD62036.1
Polysaccharide export outer membrane protein.
       0.564
SDD62162.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.461
SDD62203.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.461
Your Current Organism:
Mucilaginibacter pineti
NCBI taxonomy Id: 1391627
Other names: CIP 110632, LMG 28160, LMG:28160, M. pineti, Mucilaginibacter pineti Paiva et al. 2014, Mucilaginibacter sp. M47C3B, strain M47C3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.