STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE32545.1mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system. (108 aa)    
Predicted Functional Partners:
SDE32580.1
Hypothetical protein.
       0.773
SDF60136.1
Hypothetical protein.
  
     0.592
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.546
SDF51766.1
Predicted nucleic acid-binding protein, contains PIN domain.
  
     0.512
SDF51039.1
Cyclically-permuted mutarotase family protein.
  
     0.423
SDF51793.1
Uncharacterised protein family (UPF0175).
 
     0.405
Your Current Organism:
Mucilaginibacter pineti
NCBI taxonomy Id: 1391627
Other names: CIP 110632, LMG 28160, LMG:28160, M. pineti, Mucilaginibacter pineti Paiva et al. 2014, Mucilaginibacter sp. M47C3B, strain M47C3B
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.