STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE85218.1Parallel beta-helix repeat (two copies). (511 aa)    
Predicted Functional Partners:
SDE85139.1
MFS transporter, SP family, arabinose:H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.773
SDE85164.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
       0.773
SDE85186.1
Xylose isomerase-like TIM barrel.
       0.773
SDE85241.1
Hypothetical protein.
       0.639
SDE85269.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
       0.639
SDE85117.1
Transcriptional regulator, AraC family.
 
     0.602
SDE85293.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
   0.576
SDE85523.1
Thioredoxin-like.
   
   0.439
SDE18021.1
Lactoylglutathione lyase.
  
     0.410
SDE85320.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
   
   0.404
Your Current Organism:
Mucilaginibacter pineti
NCBI taxonomy Id: 1391627
Other names: CIP 110632, LMG 28160, LMG:28160, M. pineti, Mucilaginibacter pineti Paiva et al. 2014, Mucilaginibacter sp. M47C3B, strain M47C3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.