STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF66276.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
SDE29050.1
Outer membrane transport energization protein TonB.
  
   0.772
SDF59354.1
Hypothetical protein.
  
     0.737
SDE28922.1
TonB dependent receptor.
  
    0.733
SDF34894.1
Hypothetical protein.
  
     0.714
SDE30322.1
Putative porin.
  
     0.696
SDD66972.1
Hypothetical protein.
  
     0.685
SDE27961.1
Hypothetical protein.
  
     0.685
SDE28892.1
Tetratricopeptide repeat-containing protein.
  
     0.671
SDD93814.1
Hypothetical protein.
  
     0.670
SDF59327.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.670
Your Current Organism:
Mucilaginibacter pineti
NCBI taxonomy Id: 1391627
Other names: CIP 110632, LMG 28160, LMG:28160, M. pineti, Mucilaginibacter pineti Paiva et al. 2014, Mucilaginibacter sp. M47C3B, strain M47C3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.