STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_0724Putative TolA protein. (275 aa)    
Predicted Functional Partners:
AKJ08_0725
Biopolymer transport protein ExbD/TolR.
  
 
 0.923
AKJ08_0726
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.902
AKJ08_2434
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
  
 
 0.831
AKJ08_2684
Outer membrane vitamin B12 receptor BtuB.
 
 
 
 0.757
AKJ08_2526
Cell division protein FtsK.
 
     0.752
tolB
tolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.734
AKJ08_1352
TonB-dependent receptor.
  
 
 0.734
AKJ08_1668
Chromosome partition protein smc.
  
     0.732
AKJ08_1652
Adventurous gliding motility protein K.
  
     0.723
AKJ08_1697
TPR domain protein, putative component of TonB system.
  
   
 0.693
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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