STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_0747Hypothetical protein. (356 aa)    
Predicted Functional Partners:
AKJ08_0352
Glycine-rich cell wall structural protein 1 precursor.
  
     0.615
AKJ08_0745
Response regulator.
   
   0.521
AKJ08_0748
Flagellar sensor histidine kinase FleS.
   
   0.468
AKJ08_0749
Response regulator of zinc sigma-54-dependent two-component system.
   
   0.467
AKJ08_2037
Putative extracellular nuclease.
  
     0.446
AKJ08_3501
Hypothetical protein.
  
     0.436
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.