STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_2612PTS system, mannose-specific IID component. (268 aa)    
Predicted Functional Partners:
AKJ08_2613
PTS system, mannose-specific IIC component.
 
 0.999
AKJ08_2615
PTS system, mannose-specific IIA component.
 
 0.999
AKJ08_2614
PTS system, mannose-specific IIB component.
 
 
 0.997
AKJ08_2611
Phosphocarrier protein of PTS system.
    
 0.984
AKJ08_2441
Phosphomannomutase.
    
  0.901
AKJ08_2724
Phosphomannomutase.
    
  0.901
AKJ08_1420
Glucose-1-phosphate adenylyltransferase related protein.
     
  0.900
AKJ08_2610
Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
   
 0.858
AKJ08_1078
PTS system, cellobiose-specific IIC component.
  
  
 0.771
AKJ08_1079
PTS system, cellobiose-specific IIC component.
  
  
 0.768
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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