STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_2651Glutaryl-CoA dehydrogenase. (392 aa)    
Predicted Functional Partners:
AKJ08_2751
Enoyl-CoA hydratase.
 
 0.985
AKJ08_2752
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.937
AKJ08_2634
Butyryl-CoA dehydrogenase.
  
  
 
0.925
AKJ08_2146
Butyryl-CoA dehydrogenase.
  
  
 
0.918
AKJ08_0646
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
 0.909
AKJ08_0647
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase.
   
 
 0.904
AKJ08_2124
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase.
   
 
 0.904
AKJ08_2030
3-aminobutyryl-CoA ammonia-lyase.
    
 0.901
AKJ08_2144
Electron transfer flavoprotein, alpha subunit.
 
 0.785
AKJ08_2652
Hypothetical protein.
       0.773
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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